Program


Home
Venue
Program
Registration
Search
Sponsors
Contact

Final Program

Download all available presentations (zip, tar)

Also available in PDF

March
28 - Registration & Opening Reception
5:30 pm -
8:00 pm
Registration Kon Tiki Foyer
6:00 pm -
9:00 pm
Reception Kon Tiki Ballroom
5:30 pm -
9:00 pm
4'x8' Poster Setup Toucan and Macaw room
29 - Scientific Session Day 1
Kon Tiki Ballroom with Foyer
8:00 am Breakfast Toucan and Macaw room
8:45 am Co-organizers Welcome
Session I
Systems Biology
chairperson: Bernhard Palsson
9:00 am Shankar Subramaniam Cellular Physiology - Mapping Genotype to Phenotype in Mammalian Cells
9:30 am Giovanni Paternostro Systems Biology of Cardiac Aging
10:00 am Break Toucan and Macaw room
Session II
Genetic Circuits
chairperson: Shankar Subramaniam
10:30 am Jeffrey Hasty Synthetic Molecular Biology: Bioengineering at the Genome Scale
11:00 am Jeremy Rice A Plausible Model for the Digital Response of p53 to DNA Damage: A Tale of Limiting Resources, Negative Feedback and Time Delays.
11:30 am Tery Ideker Modeling Cells with Protein Networks
12:00 pm Lunch and Posters Beach North/Toucan and Macaw
Session III
Metabolic Networks
chairperson: Giovanni Paternostro
1:30 pm Bernhard Palsson Reconstructing the Mitochondrial Metabolic Network in the Human Cardiac Myocyte and Determining its Functional States
2:00 pm James Bassingthwaighte Linking Cell to System: Myocardial Metabolism to Cardiac Output Regulation
2:30 pm Satoshi Matsuoka Simulation of cardiac energy metabolism using an integrated mitochondria model
3:00 pm Nicolas Smith Simulating Cardiac Acidosis Across Spatial Scales
3:30 pm Break Toucan and Macaw room
Session IV
Multi-Scale Modeling
chairperson: Peter Hunter
4:00 pm Natalia Trayanova Simulation of Cardiac Defibrillation
4:30 pm Chris Johnson Multi-field Visualization
5:00 - 6:30 pm Posters Toucan and Macaw room
6:30 pm Dinner Cruise Bahia Belle
 
30 - Scientific Session Day 2
 Kon Tiki Ballroom with Foyer
8:00 am Breakfast Toucan and Macaw room
Session V
Frameworks and Ontologies
chairperson: Andrew McCulloch
9:00 am Peter Hunter An Update on the IUPS Physiome Project
9:30 am Dan Cook Ontology-Based Symbolic Models of Anatomy, Physiology and Pathology:  Autogeneration of Mathematical Models
10:00 am Brian Athey The Challenges of Big Science and the Limits of the Individual
10:30 am Break Toucan and Macaw room
Session VI
Multi-Scale Cell Modeling
chairperson: James Bassingthwaighte
11:00 am Leslie Loew The Virtual Cell Project
11:30 am Mary Ann Martone Spatially Realistic Modeling of Cellular Microdomains
12:00 pm Tom Bartol Evidence for Ectopic Neurotransmitter Release in a Monte Carlo Model of a Nicotinic Synapse
12:30 pm Lunch and Posters Beach North/Toucan and Macaw
Session VII
Cardiac Cell Modeling
chairperson: Yoram Rudy
2:00 pm Denis Noble Applications of Heart Modelling to Problems of Arrhythmia
2:30 pm Donald Bers Local [Ca] and [Na] Gradients in Cardiac Excitation-Contraction Coupling
3:00 pm Jeffrey Saucerman Modeling Neurohumoral Regulation of Cardiac Physiology
3:30 pm Break Toucan and Macaw
Session VIII
Multi-scale Heart Modeling
chairperson: Brian Athey
4:00 pm Craig Henriquez 3D Microstructure Modeling of the Heart
4:30 pm Alan Garfinkel Dynamics of Cardiac Fibrillation
5:00 pm Yoram Rudy Noninvasive Electrocardiographic Imaging (ECGI) of Human Cardiac Electrophysiology and Arrhythmias
5:30 pm Closing Remarks  
Posters taken down by 7:00 pm
31 - IUPS Annual Meeting begins
Apr
02 - FASEB Annual Meeting begins
05 - IUPS Annual Meeting concludes
06 - FASEB Annual Meeting concludes
 
 

 

Invited Speakers
  • Athey, Brian
    • University of Michgan
  • Bartol, Tom
    • Salk Institute
  • Bassingthwaighte, James
    • University of Washington
  • Bers, Donald
    • Loyola University, Chicago
  • Cook, Dan
    • Fred Hutchinson Cancer Research Center
  • Garfinkel, Alan
    • University of California, Los Angles
  • Hasty, Jeffrey
    • University of California, San Diego
  • Henriquez, Craig
    • Duke University
  • Hunter, Peter
    • University of Auckland, NZ
  • Ideker, Trey
    • University of California, San Diego
  • Johnson, Chris
    • University of Utah
  • Loew, Leslie
    • University of Connecticut Health Center
  • Martone, Mary Ann
    • University of California, San Diego
  • Matsuoka, Satoshi
    • Kyoto University, Japan
  • Noble, Denis
    • Oxford University, United Kingdom
  • Palsson, Bernhard
    • University of California, San Diego
  • Paternostro, Giovanni
    • Burnham Institute
  • Rice, Jeremy
    • IBM
  • Rudy, Yoram
    • Washington University, Saint Louis
  • Saucerman, Jeffrey
    • University of California, San Diego
  • Smith, Nicolas
    • University of Auckland, New Zealand
  • Subramaniam, Shankar
    • University of California, San Diego
  • Trayanova, Natalia
    • Tulane University
   

Home | Venue | Program | Registration | Search | Sponsors | Contact
National Biomedical Computation Resource
 University of California, San Diego
For problems or questions regarding this Web site contact [NBCR].
Last updated: 03/08/05.